Now, jdo2-api-2.3-ec.jar not available in the maven central repository, so we have to manually install it into our local maven repository. wget http://www.datanucleus ...
This script works with Python 3, it takes as input a VCF file and will use the SNP genotypes to create a matrix for phylogenetic analysis in the PHYLIP (relaxed version), FASTA, NEXUS, or binary NEXUS ...
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